species:   Artha
pid:       MI0000191
parent:    ath-MIR160b
paralog:   
locus:     4:9888982-9889070
matures:   ['UGCCUGGCUCCCUGUAUGCCA', 'GCGUACAGAGUAGUCAAGCAUG']
srr:       SRR9216050
genome:    /Users/jax/+Genomes/Plant_genomes/Artha.TAIR10_chr_all.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216050.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Artha.SRR9216050.cram 4:9888982-9889070

0 out of bounds
40 alignments
40 proper strand
32 stranded perfect matches

  ***********************                                      ************************  
GUCGUGCCUGGCUCCCUGUAUGCCACAAGAAAACAUCGAUUUAGUUUCAAAAUCGAUCACUAGUGGCGUACAGAGUAGUCAAGCAUGAC
(((((((.((((((.(((((((((((.((.....((((((((.......))))))))..)).))))))))))).).))))).)))))))
----UGCCUGGCUCCCUGUAUGCCA---------------------------------------------------------------- l=21 a=10 c
-----------------------------------------------------------------GCGUACAGAGUAGUCAAGCAUG-- l=22 a=5 c*
----UGCCUGGCUCCCUGUAUGCCA---------------------------------------------------------------- l=21 a=10 ma
-----------------------------------------------------------------GCGUACAGAGUAGUCAAGCAUG-- l=22 a=5 ma*

---GUGCCUGGCUCCCUGUAUGCC----------------------------------------------------------------- l=21 a=9 
---GUGCCUGGCUCCCUGUAUGCu----------------------------------------------------------------- l=21 a=4 
---GUGCCUGGCUCCCUGUAUGCa----------------------------------------------------------------- l=21 a=1 
----UGCCUGGCUCCCUGUAUGC------------------------------------------------------------------ l=19 a=2 
----UGCCUGGCUCCCUGUAUGCu----------------------------------------------------------------- l=20 a=2 
----UGCCUGGCUCCCUGUAUGCC----------------------------------------------------------------- l=20 a=2 
----UGCCUGGCUCCCUGUAUGCCA---------------------------------------------------------------- l=21 a=10 (c,ma)
----UGCCUGGCUCCCUGUAUGCCg---------------------------------------------------------------- l=21 a=1 
-----------------------------------------------------------------GCGUACAGAGUAGUCAAGCAUG-- l=22 a=5 (c*,ma*)
-----------------------------------------------------------------GCGUACAGAGUAGUCAAGCAUGA- l=23 a=2 
------------------------------------------------------------------CGUACAGAGUAGUCAAGCAUGA- l=22 a=2 

mb-01111
ax-1111111
ku-01
ss-111111111111
fn-111
